Andreia Teixeira and Francisco Fernandes and A. P. Francisco, SpliceTAPyR – An Efficient Method For Transcriptome Alignment, International Journal of Foundations of Computer Science, 29(8), pp. 1297-1310, Dec. 2018, World Scientific Publishing Co. Article [DOI link]
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Research Focus
Information Systems Engineering
- Enterprise architecture and engineering
- Business process management
- Requirements engineering
- Model-driven engineering
- Knowledge engineering
Data Science and Engineering
- Machine learning
- Algorithms and complexity
- Data profiling, cleaning and integration
- Data analytics
- Information retrieval
- Spatial data science
Algorithms Engineering
- Algorithms and data structures
- Succinct data dtructures
- Combinatorial optimization
- Computational science
We aim at designing novel processes, techniques and technology for the analysis, design, development and integration of complex information systems, and focus on advancing and exploring synergies in related topics.
Recently Published Papers
[View All]Pradeeban Kathiravelu and Ashish Sharma and Helena Galhardas and Peter Van Roy and Luís Veiga, On-demand big data integration, Distributed and Parallel Databases, (), pp. 1-23, Sep. 2018, Springer. [DOI link]
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Nuno D. Mendes and Rui Miguel Carrasqueiro Henriques and Elisabeth Remy and Jorge Carneiro and Pedro T. Monteiro and Claudine Chaouiya, Estimating attractor reachability in asynchronous logical models, Frontiers in Physiology, (), pp. , Jul. 2018, . [DOI link]
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Rui Miguel Carrasqueiro Henriques and Sara C. Madeira, Triclustering Algorithms for Three-Dimensional Data Analysis: A Comprehensive Survey, ACM Computing Surveys (CSUR), (), pp. , Jun. 2018, .
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Paulo Jorge Fernandes Carreira and António Aguiar Costa and Vitor Mansur and Artur A. Arsénio, Can HVAC really learn from users? A simulation-based study on the effectiveness of voting for comfort and energy use optimisation, Sustainable Cities and Society, (), pp. , May. 2018, Elsevier. Article [DOI link]
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Current Projects
[View All]EXCELERATE
ELIXIR-EXCELERATE: Fast-track ELIXIR Implementation and drive early user exploitation across the life-sciences (II11003)
Elixir has been awarded €19 millions from the EU to accelerate the implementation of Europe´s life-science data infrastructure over the next four years. From September 2015,…
BIRDS
Bioinformatics and Information Retrieval Data Structures Analysis and Design (II11006)
The overall goal of BIRDS is to establish a long term international network involving leading researchers in bioinformatics and information retrieval from four different continents, to…
GoLocal
GoLocal From monitoring global data streams to contextaware recommendations (II11004)
This ERI proposes to advance big data technology for supporting the development of new information businesses and services. Our longterm vision aims at making big data…
NEUROCLINOMICS2
NEUROCLINOMICS2 - Unravelling Prognostic Markers in NEUROdegenerative diseases through CLINical and OMICS data integration (II11035)
The motivation for NEUROCLINOMICS (PTDC/EIA-EIA/111239/2009) was the largely recognized need for integrative approaches allowing a broader study of brain related pathologies. Its contribution emphasized the relevance…